Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1688

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,912,041	+				+0.0
1,912,042	-				+0.3
1,912,140	+				+0.0
1,912,140	+				+1.4
1,912,141	-				-0.4
1,912,238	-		Rv1687c	0.11	+0.3
1,912,319	-		Rv1687c	0.22	+1.1
1,912,590	-		Rv1687c	0.57	-0.5
1,912,646	+		Rv1687c	0.64	+0.3
1,912,646	+		Rv1687c	0.64	-0.7
1,912,647	-		Rv1687c	0.64	-0.1
1,913,041	+		Rv1688	0.10	+0.4
1,913,042	-		Rv1688	0.10	+0.4
1,913,088	-		Rv1688	0.18	-1.5
1,913,088	-		Rv1688	0.18	-1.1
1,913,189	+		Rv1688	0.34	-0.7
1,913,190	-		Rv1688	0.34	-0.4
1,913,265	+		Rv1688	0.47	-0.8