Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1683

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,906,618	-		Rv1682	0.23	+1.7
1,906,764	+		Rv1682	0.39	+0.0
1,906,765	-		Rv1682	0.39	-2.1
1,906,765	-		Rv1682	0.39	-1.0
1,906,829	-		Rv1682	0.46	-0.3
1,907,230	+				+1.7
1,907,286	+				+1.4
1,907,319	-				-2.4
1,907,571	+				+0.3
1,908,062	+		Rv1683	0.16	-0.6
1,909,019	+		Rv1683	0.47	-0.8
1,909,677	+		Rv1683	0.69	-1.2
1,909,706	+		Rv1683	0.70	-0.4
1,910,125	+		Rv1683	0.84	-2.3
1,910,125	+		Rv1683	0.84	-0.6
1,910,136	+		Rv1683	0.85	-1.3
1,910,276	+		Rv1683	0.89	-2.6
1,910,276	+		Rv1683	0.89	+0.5
1,910,276	+		Rv1683	0.89	-0.6
1,910,283	+		Rv1683	0.90	-0.8