Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1597

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,798,239	+				+0.1
1,798,239	+				+1.1
1,798,243	+				-0.3
1,798,243	+				+0.6
1,798,244	-				-0.3
1,798,244	-				+0.2
1,798,268	-				-0.2
1,798,268	-				-0.0
1,798,282	-				-0.2
1,798,452	-		Rv1597	0.21	-2.9
1,798,452	-		Rv1597	0.21	-0.4
1,798,546	-		Rv1597	0.33	-0.7
1,798,546	-		Rv1597	0.33	-0.9
1,798,708	+		Rv1597	0.55	-0.8
1,798,709	-		Rv1597	0.55	-1.8
1,798,796	-		Rv1597	0.66	-0.5
1,798,900	+		Rv1597	0.80	-0.2
1,798,901	-		Rv1597	0.80	-0.2
1,799,069	-				-0.8
1,799,253	-		Rv1598c	0.44	+0.3
1,799,253	-		Rv1598c	0.44	+0.4
1,799,253	-		Rv1598c	0.44	+1.5
1,799,402	-		Rv1598c	0.80	+0.2
1,799,511	-				-1.4