Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1362c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,533,457	+		Rv1361c	0.85	-0.6
1,533,658	+				-0.8
1,533,662	+				+0.9
1,533,663	-				+0.0
1,533,717	-				+1.6
1,533,798	+				-0.3
1,533,798	+				+0.3
1,533,939	+				+1.7
1,533,949	+				-0.2
1,533,950	-				+0.0
1,533,950	-				-0.4
1,533,996	+				+1.5
1,534,046	+		Rv1362c	0.15	-1.6
1,534,047	-		Rv1362c	0.15	-0.0
1,534,099	-		Rv1362c	0.23	-0.2
1,534,193	-		Rv1362c	0.37	-0.4
1,534,360	+		Rv1362c	0.62	-1.4
1,534,361	-		Rv1362c	0.62	-0.9
1,534,363	-		Rv1362c	0.63	-0.9
1,534,597	-				-2.4
1,534,638	+				-0.2
1,534,638	+				-1.4
1,534,638	+				+1.2
1,535,155	-		Rv1363c	0.70	-0.6
1,535,155	-		Rv1363c	0.70	+0.5
1,535,173	-		Rv1363c	0.72	-0.8
1,535,199	+		Rv1363c	0.75	-0.3
1,535,400	-				+0.5
1,535,413	-				+0.8
1,535,447	+				-0.3
1,535,461	-				+0.2
1,535,572	+				+1.4
1,535,572	+				+0.7