Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1255c
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
|---|---|---|---|---|---|
| remove | |||||
| 1,402,702 | + | +1.1 | |||
| 1,402,964 | + | Rv1255c | 0.31 | -1.0 | |
| 1,403,051 | - | Rv1255c | 0.45 | -0.4 | |
| 1,403,194 | - | Rv1255c | 0.68 | -1.5 | |
| 1,403,306 | - | Rv1255c | 0.87 | -2.9 | |
| 1,403,429 | + | +0.1 | |||
| 1,403,905 | + | Rv1256c | 0.43 | -0.7 | |
| 1,404,141 | - | Rv1256c | 0.62 | -2.7 | |
| 1,404,176 | - | Rv1256c | 0.65 | -0.5 |
Or see this region's nucleotide sequence