Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0987

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,101,800	+				-0.0
1,101,801	-				-1.5
1,101,833	-				+0.2
1,102,417	+		Rv0986	0.82	+0.2
1,102,459	-		Rv0986	0.88	-0.4
1,102,477	-				-0.3
1,102,840	-		Rv0987	0.12	+0.5
1,103,438	-		Rv0987	0.35	-0.3
1,103,452	+		Rv0987	0.35	-0.3
1,103,464	+		Rv0987	0.36	-0.3
1,103,684	-		Rv0987	0.44	+0.5
1,103,800	+		Rv0987	0.49	+0.7
1,103,801	-		Rv0987	0.49	+1.7
1,103,801	-		Rv0987	0.49	-0.0
1,103,973	-		Rv0987	0.56	+0.7
1,104,040	+		Rv0987	0.58	-0.9
1,104,185	+		Rv0987	0.64	-0.1
1,104,271	+		Rv0987	0.67	+0.9
1,104,291	-		Rv0987	0.68	-1.6
1,104,619	+		Rv0987	0.81	-0.2
1,104,669	-		Rv0987	0.83	+0.3
1,104,711	-		Rv0987	0.84	-0.1
1,104,755	+		Rv0987	0.86	-0.1
1,104,848	-		Rv0987	0.90	+0.6
1,105,050	-				+0.3
1,105,113	+				-0.6
1,105,144	+				+1.1
1,105,315	-		Rv0988	0.17	-0.4
1,105,473	+		Rv0988	0.31	+0.4
1,105,475	+		Rv0988	0.31	+0.1