Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0973c
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
|---|---|---|---|---|---|
| remove | |||||
| 1,082,777 | + | Rv0972c | 0.17 | -0.1 | |
| 1,082,777 | + | Rv0972c | 0.17 | -2.0 | |
| 1,082,778 | - | Rv0972c | 0.17 | +0.1 | |
| 1,083,205 | + | Rv0972c | 0.53 | +0.4 | |
| 1,083,543 | - | Rv0972c | 0.82 | +0.2 | |
| 1,083,811 | - | -0.1 | |||
| 1,084,519 | - | Rv0973c | 0.39 | +0.1 | |
| 1,084,567 | + | Rv0973c | 0.41 | +0.5 | |
| 1,084,567 | + | Rv0973c | 0.41 | -0.0 | |
| 1,084,568 | - | Rv0973c | 0.41 | -2.2 | |
| 1,084,912 | + | Rv0973c | 0.58 | -1.3 | |
| 1,086,102 | + | Rv0974c | 0.22 | -0.2 | |
| 1,086,214 | - | Rv0974c | 0.29 | -0.5 |
Or see this region's nucleotide sequence