Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0917

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,021,115	+		Rv0915c	0.83	-0.1
1,021,116	-		Rv0915c	0.83	-0.7
1,021,116	-		Rv0915c	0.83	-0.4
1,021,197	-		Rv0915c	0.90	+0.5
1,021,256	-				-0.3
1,021,283	+				-0.0
1,021,284	-				-1.1
1,021,524	+		Rv0916c	0.60	-0.2
1,021,525	-		Rv0916c	0.60	-0.1
1,021,693	-				-0.1
1,021,697	-				-0.4
1,021,733	+				-1.5
1,022,087	-				+2.0
1,022,207	+				-1.5
1,022,276	+		Rv0917	0.11	+0.7
1,022,276	+		Rv0917	0.11	-0.3
1,022,465	+		Rv0917	0.21	-0.9
1,022,503	+		Rv0917	0.23	-0.6
1,022,573	+		Rv0917	0.27	-0.2
1,022,574	-		Rv0917	0.27	-1.6
1,022,600	+		Rv0917	0.29	-0.7
1,022,600	+		Rv0917	0.29	-0.8
1,022,673	+		Rv0917	0.33	-0.7
1,022,674	-		Rv0917	0.33	-0.6
1,022,674	-		Rv0917	0.33	+0.3
1,022,783	+		Rv0917	0.39	-0.1
1,022,999	+		Rv0917	0.51	-0.4
1,022,999	+		Rv0917	0.51	-0.4
1,023,000	-		Rv0917	0.51	-0.3
1,023,000	-		Rv0917	0.51	+0.1
1,023,074	-		Rv0917	0.55	+0.3
1,023,074	-		Rv0917	0.55	-0.3
1,023,081	-		Rv0917	0.56	-0.9
1,023,211	+		Rv0917	0.63	-0.6
1,023,211	+		Rv0917	0.63	+0.7
1,023,335	-		Rv0917	0.70	-0.9
1,023,335	-		Rv0917	0.70	-2.8
1,023,376	+		Rv0917	0.72	-0.8
1,023,377	-		Rv0917	0.72	-0.3
1,023,459	-		Rv0917	0.77	+0.3
1,023,480	+		Rv0917	0.78	-0.4
1,023,544	+		Rv0917	0.82	+0.1
1,023,749	+				+0.2
1,023,749	+				-1.6
1,023,750	-				-0.4
1,023,751	+				-0.9
1,023,751	+				+2.2
1,023,752	-				-0.7
1,023,752	-				+1.3
1,023,753	+				-1.1
1,023,753	+				-0.9
1,024,300	+		Rv0918	0.19	-0.1
1,024,345	+		Rv0918	0.28	-0.5
1,024,345	+		Rv0918	0.28	+1.4
1,024,405	+		Rv0918	0.41	-0.1
1,024,768	+		Rv0919	0.17	-0.0
1,024,769	-		Rv0919	0.17	+0.2
1,024,855	+		Rv0919	0.34	-0.7