Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0282
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
---|---|---|---|---|---|
remove | |||||
341,247 | + | Rv0281 | 0.27 | +0.7 | |
341,248 | - | Rv0281 | 0.28 | -0.6 | |
341,248 | - | Rv0281 | 0.28 | -1.4 | |
341,260 | - | Rv0281 | 0.29 | -1.1 | |
341,260 | - | Rv0281 | 0.29 | -0.5 | |
341,550 | + | Rv0281 | 0.61 | +0.4 | |
341,666 | + | Rv0281 | 0.73 | +2.7 | |
341,734 | - | Rv0281 | 0.81 | +0.3 | |
341,812 | - | Rv0281 | 0.90 | +0.2 | |
341,968 | + | -0.1 | |||
341,969 | - | +0.5 | |||
341,988 | - | -0.7 | |||
342,004 | - | +0.8 | |||
342,032 | - | +0.5 | |||
342,032 | - | +0.7 | |||
342,140 | + | +0.2 | |||
342,215 | + | +0.1 |
Or see this region's nucleotide sequence