Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0104

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
121,398	-		Rv0103c	0.66	-1.2
121,500	+		Rv0103c	0.70	-0.3
121,549	-		Rv0103c	0.72	-0.5
121,766	+		Rv0103c	0.82	-1.2
121,766	+		Rv0103c	0.82	-0.1
121,766	+		Rv0103c	0.82	-0.2
121,766	+		Rv0103c	0.82	-1.0
121,767	-		Rv0103c	0.82	-0.7
121,767	-		Rv0103c	0.82	-0.6
121,767	-		Rv0103c	0.82	-1.5
121,767	-		Rv0103c	0.82	-2.0
121,767	-		Rv0103c	0.82	+0.4
121,770	+		Rv0103c	0.82	-2.1
121,770	+		Rv0103c	0.82	+1.0
121,771	-		Rv0103c	0.82	+1.3
121,771	-		Rv0103c	0.82	+0.0
122,045	+				-1.9
122,046	-				-0.5
122,046	-				-1.0
122,105	-				-0.6
122,105	-				+0.2
122,105	-				-0.3
122,105	-				-0.3
122,193	+				+0.5
122,211	+				+1.8
122,212	-				-0.1
122,243	+				+0.1
122,244	-				+0.3
122,244	-				-0.3
122,388	+				-0.5
122,388	+				-0.2
122,445	-				-0.2
122,494	+		Rv0104	0.12	+0.6
122,495	-		Rv0104	0.12	+0.6
122,495	-		Rv0104	0.12	-1.2
122,542	+		Rv0104	0.15	-2.1
122,542	+		Rv0104	0.15	+1.0
122,543	-		Rv0104	0.15	+0.1
122,543	-		Rv0104	0.15	-0.1
122,596	+		Rv0104	0.18	-0.2
122,609	+		Rv0104	0.19	-0.2
122,609	+		Rv0104	0.19	-0.2
122,610	-		Rv0104	0.19	+0.0
122,610	-		Rv0104	0.19	-0.2
122,610	-		Rv0104	0.19	+0.4
122,643	+		Rv0104	0.22	+0.4
122,697	-		Rv0104	0.25	-0.5
122,835	-		Rv0104	0.34	-0.6
122,837	-		Rv0104	0.34	-0.2
122,993	-		Rv0104	0.45	-1.3
123,122	+		Rv0104	0.53	-0.2
123,122	+		Rv0104	0.53	-0.1
123,123	-		Rv0104	0.53	-1.2
123,243	+		Rv0104	0.61	+0.6
123,243	+		Rv0104	0.61	+1.8
123,244	-		Rv0104	0.61	+1.9
123,346	+		Rv0104	0.68	-0.2
123,346	+		Rv0104	0.68	-0.1
123,521	-		Rv0104	0.79	-0.2
123,522	+		Rv0104	0.80	+1.1
123,612	+		Rv0104	0.85	+0.9
123,830	-				-0.2
123,896	+				+1.8
123,896	+				-0.9
123,906	+				-1.3
123,906	+				-1.0
123,910	+				-0.5
123,910	+				-1.8
123,910	+				+0.3
123,911	-				-0.6
123,911	-				-0.3
123,911	-				-0.2
123,911	-				-1.3
123,911	-				+0.3
124,379	+				+0.2
124,390	+				+0.8
124,391	-				-2.1