Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0029

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
31,066	+				-0.3
31,075	+				+3.3
31,076	-				-0.6
31,154	-				-1.5
31,223	+		Rv0027	0.11	+0.2
31,324	-		Rv0027	0.42	+0.2
31,381	+		Rv0027	0.60	-0.6
31,589	+		Rv0028	0.25	-0.6
31,597	+		Rv0028	0.27	-1.2
31,597	+		Rv0028	0.27	+1.9
31,597	+		Rv0028	0.27	-0.1
31,598	-		Rv0028	0.27	-0.0
31,598	-		Rv0028	0.27	-1.4
31,701	+		Rv0028	0.61	+1.8
31,702	-		Rv0028	0.61	+0.2
31,826	-				-0.3
31,967	+				+1.8
31,968	-				-1.8
32,051	+				+0.4
32,134	+				-0.8
32,197	+		Rv0029	0.13	-1.1
32,254	-		Rv0029	0.18	+0.0
32,403	+		Rv0029	0.32	+0.8
32,673	+		Rv0029	0.56	-0.0
32,674	-		Rv0029	0.56	+0.2
32,777	+		Rv0029	0.66	+0.7
32,777	+		Rv0029	0.66	-0.1
32,778	-		Rv0029	0.66	-2.0
32,778	-		Rv0029	0.66	+1.4
32,778	-		Rv0029	0.66	-0.8
32,778	-		Rv0029	0.66	+0.8
33,023	+		Rv0029	0.88	+1.2
33,023	+		Rv0029	0.88	-0.8
33,046	-				+0.3
33,058	+				-0.1
33,058	+				-0.0
33,058	+				-0.3
33,059	-				+0.1
33,059	-				-0.2
33,059	-				+0.4
33,114	-				-0.2
33,217	+				-0.3
33,218	-				-0.3
33,218	-				-2.1
33,218	-				+0.8
33,355	+		Rv0030	0.40	+0.3
33,360	-		Rv0030	0.41	-0.4
33,797	+				-0.6
33,798	-				-0.7
33,861	+				-0.0
33,862	-				-0.2