Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3107c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
3,474,400	+		Rv3106	0.29	-0.8
3,474,401	-		Rv3106	0.29	-0.2
3,474,428	+		Rv3106	0.31	-1.2
3,474,458	+		Rv3106	0.33	+0.2
3,474,459	-		Rv3106	0.33	-0.0
3,474,459	-		Rv3106	0.33	-0.3
3,474,563	+		Rv3106	0.41	-0.7
3,474,577	-		Rv3106	0.42	+0.6
3,474,770	-		Rv3106	0.56	-0.7
3,475,069	+		Rv3106	0.77	-0.2
3,475,481	+				-0.7
3,475,527	+				-0.0
3,475,613	+		Rv3107c	0.15	-0.1
3,475,613	+		Rv3107c	0.15	-0.1
3,475,625	+		Rv3107c	0.16	+0.6
3,475,647	-		Rv3107c	0.17	+0.1
3,475,687	+		Rv3107c	0.20	-0.8
3,475,688	-		Rv3107c	0.20	+0.1
3,475,688	-		Rv3107c	0.20	+0.4
3,476,066	+		Rv3107c	0.43	+1.1
3,476,319	+		Rv3107c	0.59	-0.6
3,476,320	-		Rv3107c	0.59	+1.3
3,476,320	-		Rv3107c	0.59	+2.1
3,476,325	+		Rv3107c	0.60	-1.2
3,476,327	+		Rv3107c	0.60	+0.9
3,476,328	-		Rv3107c	0.60	+1.9
3,476,328	-		Rv3107c	0.60	+2.4
3,476,966	-				-0.0
3,477,031	+				-1.3
3,477,121	+		Rv3108	0.14	+0.9
3,477,581	+				-0.1
3,477,781	-		Rv3109	0.12	-0.3