Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2919c
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
|---|---|---|---|---|---|
| remove | |||||
| 3,230,940 | + | Rv2919c | 0.60 | -1.1 | |
| 3,231,103 | + | -0.5 | |||
| 3,231,103 | + | -0.6 | |||
| 3,231,104 | - | -0.1 | |||
| 3,231,105 | + | +0.4 | |||
| 3,231,105 | + | +0.8 | |||
| 3,231,106 | - | +1.0 | |||
| 3,231,362 | + | Rv2920c | 0.20 | +0.3 | |
| 3,231,646 | - | Rv2920c | 0.40 | +0.6 | |
| 3,231,909 | + | Rv2920c | 0.58 | -1.2 |
Or see this region's nucleotide sequence