Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2422

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
2,718,846	-				+0.3
2,718,853	+				-0.4
2,718,854	-				-1.0
2,718,937	-				+1.5
2,718,937	-				+1.3
2,719,052	+				-1.5
2,719,053	-				-0.4
2,719,166	+		Rv2422	0.30	+1.1
2,719,167	-		Rv2422	0.31	-0.5
2,719,181	-		Rv2422	0.36	+0.0
2,719,431	+				+1.9
2,719,559	+				-1.4
2,719,560	-				-0.2
2,719,573	+				-2.6
2,719,574	-				+1.2
2,719,585	+				-0.4
2,719,585	+				+0.1
2,719,585	+				-0.2
2,719,585	+				-0.7
2,719,586	-				-0.1
2,719,586	-				+0.9
2,719,586	-				+0.5
2,719,666	+				-0.4
2,719,667	-				+0.3
2,719,730	-		Rv2423	0.13	+1.9
2,719,730	-		Rv2423	0.13	-0.7
2,719,730	-		Rv2423	0.13	+0.5
2,719,870	+		Rv2423	0.26	-0.0
2,719,870	+		Rv2423	0.26	+0.1
2,719,871	-		Rv2423	0.26	-1.2
2,719,871	-		Rv2423	0.26	+1.9
2,719,939	+		Rv2423	0.33	-0.3
2,719,940	-		Rv2423	0.33	-0.9
2,719,940	-		Rv2423	0.33	-0.5