Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1736c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
1,961,292	+				-2.0
1,961,538	+		Rv1735c	0.50	+0.1
1,961,539	-		Rv1735c	0.50	-0.9
1,961,539	-		Rv1735c	0.50	+0.2
1,961,596	-		Rv1735c	0.61	-0.2
1,961,631	-		Rv1735c	0.68	-0.1
1,961,832	+				-0.2
1,961,888	+				-0.8
1,961,889	-				-0.7
1,961,889	-				-0.6
1,961,899	+				-1.4
1,961,899	+				-0.7
1,961,969	-				-0.4
1,962,036	-				+1.8
1,962,077	+				-1.1
1,962,280	+				-2.9
1,962,281	-				+0.1
1,962,391	+				-0.3
1,962,394	+				-0.4
1,962,481	+		Rv1736c	0.13	-1.6
1,962,481	+		Rv1736c	0.13	-0.2
1,962,481	+		Rv1736c	0.13	+0.3
1,962,556	+		Rv1736c	0.17	-0.9
1,962,689	-		Rv1736c	0.24	-0.8
1,962,689	-		Rv1736c	0.24	-0.2
1,962,821	-		Rv1736c	0.30	+0.0
1,962,907	+		Rv1736c	0.35	-0.1
1,962,908	-		Rv1736c	0.35	+0.0
1,963,207	+		Rv1736c	0.50	+0.4
1,963,207	+		Rv1736c	0.50	-0.2
1,963,207	+		Rv1736c	0.50	+1.3
1,963,505	-		Rv1736c	0.65	-0.3
1,963,792	+		Rv1736c	0.80	-0.5
1,963,847	-		Rv1736c	0.83	+0.8
1,963,847	-		Rv1736c	0.83	-0.2
1,963,847	-		Rv1736c	0.83	+0.9
1,963,847	-		Rv1736c	0.83	-1.0
1,963,895	-		Rv1736c	0.85	-0.2
1,963,970	-		Rv1736c	0.89	+0.9
1,964,232	+				-0.9
1,964,232	+				-0.1
1,964,283	+				+0.8
1,964,335	-		Rv1737c	0.13	-0.1
1,964,676	+		Rv1737c	0.41	-0.3
1,964,676	+		Rv1737c	0.41	-0.8
1,964,676	+		Rv1737c	0.41	-0.5
1,964,677	-		Rv1737c	0.42	+1.8
1,964,677	-		Rv1737c	0.42	-0.2
1,964,688	+		Rv1737c	0.43	+0.7
1,964,688	+		Rv1737c	0.43	-0.9
1,964,689	-		Rv1737c	0.43	-0.2
1,964,956	+		Rv1737c	0.65	-0.2
1,965,081	+		Rv1737c	0.76	-0.5