Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1284
Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 7H9 with Hydrogen peroxide 2.5 mM; pH 6.5 |
---|---|---|---|---|---|
remove | |||||
1,436,489 | + | Rv1283c | 0.36 | -0.3 | |
1,437,048 | - | -0.7 | |||
1,437,084 | - | +1.5 | |||
1,437,084 | - | -0.4 | |||
1,437,107 | + | -0.4 | |||
1,437,342 | + | -0.5 | |||
1,437,342 | + | +0.9 | |||
1,437,342 | + | -1.3 | |||
1,437,681 | + | Rv1284 | 0.73 | -3.0 | |
1,437,834 | + | +2.1 | |||
1,437,907 | - | -0.2 | |||
1,438,624 | - | Rv1285 | 0.72 | -0.3 |
Or see this region's nucleotide sequence