Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1128c

Experiment: 7H9 with nitrite 1.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 1.5 mM; pH 5.5
1,250,902	+		Rv1127c	0.66	-1.4
1,250,947	+		Rv1127c	0.69	-1.2
1,251,322	+				+1.6
1,251,323	-				+1.6
1,251,421	+				+1.6
1,251,425	+				+1.1
1,251,426	-				-1.0
1,251,515	+				-1.8
1,251,667	+				-0.8
1,252,156	+		Rv1128c	0.40	+1.1
1,252,380	-		Rv1128c	0.56	+0.9
1,252,577	+		Rv1128c	0.71	+0.4
1,252,984	-				-1.0
1,252,984	-				-0.3
1,253,037	+				+1.3
1,253,037	+				-0.2