Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0918

Experiment: 7H9 with nitrite 1.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 1.5 mM; pH 5.5
1,023,211	+		Rv0917	0.63	-0.3
1,023,211	+		Rv0917	0.63	-1.4
1,023,335	-		Rv0917	0.70	+0.1
1,023,335	-		Rv0917	0.70	-0.2
1,023,376	+		Rv0917	0.72	-0.2
1,023,377	-		Rv0917	0.72	-0.5
1,023,459	-		Rv0917	0.77	+0.3
1,023,480	+		Rv0917	0.78	-0.9
1,023,544	+		Rv0917	0.82	+0.4
1,023,749	+				+0.2
1,023,749	+				+1.0
1,023,750	-				+0.2
1,023,751	+				+0.1
1,023,751	+				+0.3
1,023,752	-				+0.1
1,023,752	-				-0.3
1,023,753	+				+0.2
1,023,753	+				-0.3
1,024,300	+		Rv0918	0.19	-1.2
1,024,345	+		Rv0918	0.28	-0.5
1,024,345	+		Rv0918	0.28	+0.1
1,024,405	+		Rv0918	0.41	-1.2
1,024,768	+		Rv0919	0.17	+0.3
1,024,769	-		Rv0919	0.17	+0.1
1,024,855	+		Rv0919	0.34	-0.3
1,024,914	+		Rv0919	0.46	-1.2
1,024,915	-		Rv0919	0.46	+1.7
1,025,095	+		Rv0919	0.82	+0.1
1,025,141	+				-1.4
1,025,141	+				+2.2
1,025,141	+				-0.4
1,025,142	-				+0.4
1,025,142	-				+1.7
1,025,172	-				+2.3
1,025,188	+				-1.3
1,025,410	-				+1.7
1,025,418	-				-0.6
1,025,425	-				-0.6