Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0084

Experiment: 7H9 with nitrite 1.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 1.5 mM; pH 5.5
92,134	+				-0.3
92,134	+				-0.0
92,134	+				+0.7
92,135	-				-0.9
92,135	-				+0.8
92,136	+				-0.3
92,137	-				+0.3
92,137	-				-0.1
92,196	+				-0.4
92,973	+		Rv0084	0.68	-2.3
92,973	+		Rv0084	0.68	-1.1
93,774	-		Rv0085	0.73	+0.1
93,774	-		Rv0085	0.73	+1.4
94,245	-		Rv0086	0.20	-0.7
94,257	-		Rv0086	0.21	-0.5