Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2571c

Experiment: 7H9 with nitrite 1.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 1.5 mM; pH 5.5
2,893,904	-		Rv2569c	0.47	-3.8
2,893,930	-		Rv2569c	0.49	-1.9
2,893,930	-		Rv2569c	0.49	-3.1
2,893,930	-		Rv2569c	0.49	+3.7
2,893,930	-		Rv2569c	0.49	-0.3
2,894,096	-		Rv2569c	0.67	+0.1
2,894,096	-		Rv2569c	0.67	-1.4
2,894,096	-		Rv2569c	0.67	-1.9
2,894,180	-		Rv2569c	0.76	-0.8
2,894,306	-		Rv2569c	0.89	+4.0
2,894,415	-				-1.2
2,894,507	-				-0.2
2,894,507	-				-0.0
2,894,517	+				-0.5
2,894,518	-				-0.0
2,894,538	+				+0.9
2,894,749	+		Rv2570	0.61	-1.0
2,894,750	-		Rv2570	0.61	+0.4
2,894,750	-		Rv2570	0.61	+0.2
2,895,130	-		Rv2571c	0.22	+1.4
2,895,195	-		Rv2571c	0.28	+0.2
2,895,592	+		Rv2571c	0.65	+1.0
2,895,592	+		Rv2571c	0.65	+0.0
2,895,846	-		Rv2571c	0.89	+1.6
2,895,846	-		Rv2571c	0.89	+0.1
2,895,973	-				-1.3