Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0972c

Experiment: 7H9 with nitrite 1.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 1.5 mM; pH 5.5
1,081,620	+		Rv0970	0.90	-0.3
1,081,620	+		Rv0970	0.90	+0.1
1,081,620	+		Rv0970	0.90	+0.6
1,081,645	+				+0.5
1,081,755	+				-0.8
1,082,088	+		Rv0971c	0.39	+0.1
1,082,089	-		Rv0971c	0.39	+1.3
1,082,089	-		Rv0971c	0.39	+1.3
1,082,089	-		Rv0971c	0.39	+1.0
1,082,091	+		Rv0971c	0.39	-0.1
1,082,091	+		Rv0971c	0.39	+0.3
1,082,469	-		Rv0971c	0.86	+3.0
1,082,588	+				+0.4
1,082,777	+		Rv0972c	0.17	-0.6
1,082,777	+		Rv0972c	0.17	-0.4
1,082,778	-		Rv0972c	0.17	-1.2
1,083,205	+		Rv0972c	0.53	-1.7
1,083,543	-		Rv0972c	0.82	-0.5
1,083,811	-				-0.6
1,084,519	-		Rv0973c	0.39	-0.5
1,084,567	+		Rv0973c	0.41	+1.1
1,084,567	+		Rv0973c	0.41	-0.5
1,084,568	-		Rv0973c	0.41	-0.2