Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3849

Experiment: 7H9 with nitrite 3 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 3 mM; pH 5.5
4,322,736	-		Rv3848	0.45	-0.7
4,322,736	-		Rv3848	0.45	-0.7
4,323,297	+				-0.5
4,323,547	+		Rv3849	0.12	-0.2
4,323,896	-				+1.1
4,323,959	-				+0.0
4,324,235	+		Rv3850	0.33	-2.2
4,324,326	-		Rv3850	0.47	-1.7
4,324,327	+		Rv3850	0.47	-1.4
4,324,670	-				+1.2