Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1492

Experiment: 7H9 with nitrite 3 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with nitrite 3 mM; pH 5.5
1,681,207	-				-0.5
1,681,242	+				+0.7
1,681,273	-				-0.0
1,681,323	-		Rv1491c	0.15	-1.7
1,681,323	-		Rv1491c	0.15	-0.2
1,681,464	+		Rv1491c	0.34	+0.3
1,681,464	+		Rv1491c	0.34	-0.4
1,681,465	-		Rv1491c	0.34	-1.3
1,681,465	-		Rv1491c	0.34	-0.8
1,681,658	+		Rv1491c	0.59	-0.4
1,681,658	+		Rv1491c	0.59	+0.2
1,681,659	-		Rv1491c	0.59	-0.0
1,681,739	-		Rv1491c	0.70	-0.5
1,681,739	-		Rv1491c	0.70	-0.5
1,681,838	+		Rv1491c	0.83	-0.5
1,681,996	+				-0.5
1,681,996	+				+0.8
1,681,996	+				-0.7
1,681,996	+				-0.3
1,681,996	+				+0.2
1,681,996	+				+1.5
1,681,997	-				-0.2
1,682,059	+				+0.3
1,682,060	-				-0.6
1,682,081	-				-0.8
1,682,131	-				+0.0
1,682,170	+				-1.5
1,682,189	-				-0.2
1,682,331	+				-1.2
1,682,580	+		Rv1492	0.23	-0.3
1,682,580	+		Rv1492	0.23	+1.5
1,682,892	+		Rv1492	0.40	-0.6
1,682,893	-		Rv1492	0.40	+1.1
1,683,008	-		Rv1492	0.46	-1.3
1,683,508	-		Rv1492	0.73	-1.8
1,683,508	-		Rv1492	0.73	-0.1
1,683,613	+		Rv1492	0.79	-0.9
1,683,885	+				-0.5
1,683,885	+				+0.4
1,684,188	+				-0.9
1,684,188	+				-0.4
1,684,188	+				+1.5
1,684,188	+				+2.1
1,684,188	+				-0.1
1,684,189	-				+0.0
1,684,288	-		Rv1493	0.13	+0.0
1,684,585	-		Rv1493	0.26	+0.1
1,684,585	-		Rv1493	0.26	-0.4
1,684,680	+		Rv1493	0.30	-1.5
1,684,681	-		Rv1493	0.30	-1.0
1,684,686	+		Rv1493	0.30	-0.6
1,684,687	-		Rv1493	0.30	-0.7
1,684,848	+		Rv1493	0.37	-0.0