Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2005c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
2,250,140	-		Rv2004c	0.44	-0.7
2,250,768	-		Rv2004c	0.86	+0.2
2,251,578	-		Rv2005c	0.66	-0.6
2,251,578	-		Rv2005c	0.66	-0.0
2,251,578	-		Rv2005c	0.66	+0.1
2,251,581	+		Rv2005c	0.66	+0.1
2,251,597	-		Rv2005c	0.68	+0.7
2,251,741	-		Rv2005c	0.84	+2.3
2,251,741	-		Rv2005c	0.84	-0.2
2,251,842	+				-2.1
2,251,877	+				-2.6
2,251,913	-				-0.0
2,251,913	-				-0.3
2,251,913	-				+0.7
2,252,150	-				-1.9
2,252,210	-				+0.1
2,252,810	-		Rv2006	0.20	-0.4