Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1495

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
1,685,649	-		Rv1493	0.73	+1.2
1,685,727	+		Rv1493	0.76	-1.1
1,685,727	+		Rv1493	0.76	-2.3
1,685,727	+		Rv1493	0.76	-2.0
1,685,728	-		Rv1493	0.76	+1.7
1,685,728	-		Rv1493	0.76	+0.1
1,685,728	-		Rv1493	0.76	-1.0
1,686,243	+				+0.3
1,686,243	+				-1.9
1,686,371	-		Rv1494	0.33	+0.6
1,686,440	+		Rv1494	0.56	-0.2
1,686,466	+		Rv1494	0.64	-0.3
1,686,497	-		Rv1494	0.75	+0.2
1,686,502	+		Rv1494	0.76	+0.3
1,686,503	-		Rv1494	0.77	-1.4
1,686,713	-		Rv1495	0.45	-1.5
1,686,875	-				+0.1
1,687,207	+		Rv1496	0.32	+1.3
1,687,207	+		Rv1496	0.32	-1.1
1,687,568	+		Rv1496	0.68	+1.7
1,687,568	+		Rv1496	0.68	-0.3
1,687,569	-		Rv1496	0.68	-1.4
1,687,857	+				-1.2
1,687,882	+				+0.2
1,687,887	-				+0.8
1,687,887	-				-1.3