Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1243c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
1,384,565	+				-0.2
1,384,565	+				-1.2
1,384,740	-		Rv1242	0.47	-0.2
1,384,776	+		Rv1242	0.56	-0.4
1,384,777	-		Rv1242	0.56	+0.0
1,384,964	+				+1.1
1,385,025	-				-4.2
1,385,507	+		Rv1243c	0.31	+0.5
1,385,593	-		Rv1243c	0.36	-1.1
1,385,833	-		Rv1243c	0.50	-1.5
1,386,027	+		Rv1243c	0.61	-0.6
1,386,120	+		Rv1243c	0.67	+1.2
1,386,239	+		Rv1243c	0.74	-1.0
1,386,240	-		Rv1243c	0.74	-1.0
1,386,268	+		Rv1243c	0.76	-1.0
1,386,268	+		Rv1243c	0.76	-0.8
1,386,418	+		Rv1243c	0.85	+0.1
1,386,493	+		Rv1243c	0.89	+0.7
1,386,493	+		Rv1243c	0.89	-0.8
1,386,537	+				+0.0
1,386,537	+				-0.6
1,386,537	+				-1.4
1,386,537	+				-0.9
1,386,537	+				+0.7
1,386,594	-				-1.3
1,386,670	+				+1.8
1,386,670	+				-0.4
1,386,670	+				-0.2
1,386,670	+				+1.4
1,386,670	+				-0.0
1,386,671	-				-0.5
1,386,837	-				-3.4
1,387,007	+		Rv1244	0.17	-0.4
1,387,008	-		Rv1244	0.18	-2.7
1,387,170	+		Rv1244	0.36	-1.1
1,387,170	+		Rv1244	0.36	-0.8
1,387,170	+		Rv1244	0.36	-0.6
1,387,170	+		Rv1244	0.36	-0.2
1,387,170	+		Rv1244	0.36	-2.9
1,387,171	-		Rv1244	0.36	-0.8
1,387,172	+		Rv1244	0.37	-1.2