Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0408

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
490,799	+				+1.2
490,804	+				-0.9
490,804	+				+1.3
490,805	-				-2.1
490,805	-				+4.1
491,196	-		Rv0407	0.41	-1.2
491,245	+		Rv0407	0.46	-1.6
491,300	-		Rv0407	0.51	-0.3
491,390	-		Rv0407	0.60	-1.4
491,486	-		Rv0407	0.70	-2.4
491,673	-		Rv0407	0.88	-1.5
491,680	+		Rv0407	0.89	+1.0
491,681	-		Rv0407	0.89	-2.2
491,681	-		Rv0407	0.89	-1.8
491,982	-				-0.6
492,359	+		Rv0408	0.28	-0.1
492,360	-		Rv0408	0.28	+1.0
492,435	+		Rv0408	0.31	+1.1
492,869	-		Rv0408	0.52	+0.5
492,888	-		Rv0408	0.53	-0.6
493,356	+		Rv0408	0.76	-0.6
493,357	-		Rv0408	0.76	-2.5
493,364	+		Rv0408	0.76	+1.8
493,700	+				+0.1
493,806	+				-0.1
493,807	-				-2.4
494,287	-		Rv0409	0.38	-0.7
494,358	+		Rv0409	0.44	-1.7
494,359	-		Rv0409	0.44	-1.2
494,359	-		Rv0409	0.44	+0.8
494,557	-		Rv0409	0.61	-0.4
494,666	-		Rv0409	0.70	-0.8
494,745	+		Rv0409	0.77	+0.5
494,852	+		Rv0409	0.86	-0.8