Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2886c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
3,194,622	-		Rv2885c	0.33	-0.7
3,195,047	+		Rv2885c	0.64	-0.1
3,195,048	-		Rv2885c	0.64	-0.6
3,195,152	+		Rv2885c	0.71	-0.6
3,195,217	+		Rv2885c	0.76	-0.5
3,195,218	-		Rv2885c	0.76	-1.8
3,195,218	-		Rv2885c	0.76	-0.1
3,195,550	+				-1.2
3,195,639	-		Rv2886c	0.11	-0.2
3,195,639	-		Rv2886c	0.11	-0.2
3,195,741	-		Rv2886c	0.22	+0.1
3,195,741	-		Rv2886c	0.22	+0.7
3,195,918	-		Rv2886c	0.42	-0.0
3,196,080	+		Rv2886c	0.60	-1.2
3,196,081	-		Rv2886c	0.60	-1.8
3,196,133	-		Rv2886c	0.66	-1.3
3,196,144	+		Rv2886c	0.67	-1.2
3,196,311	+		Rv2886c	0.86	-1.0
3,196,312	-		Rv2886c	0.86	-2.6
3,196,438	+				+1.7
3,196,487	-		Rv2887	0.13	-0.2
3,196,709	+		Rv2887	0.66	-0.7
3,196,849	-				-1.6
3,196,922	+				+1.7
3,196,923	-				-0.3
3,196,923	-				+0.0
3,196,923	-				-0.7
3,196,923	-				-0.5
3,197,011	+		Rv2888c	0.10	-0.9
3,197,100	+		Rv2888c	0.17	-1.7
3,197,111	+		Rv2888c	0.17	-1.8
3,197,111	+		Rv2888c	0.17	-0.1
3,197,194	+		Rv2888c	0.23	+0.3
3,197,194	+		Rv2888c	0.23	+0.2
3,197,286	+		Rv2888c	0.30	-0.4
3,197,286	+		Rv2888c	0.30	+0.7
3,197,354	+		Rv2888c	0.34	-0.4
3,197,354	+		Rv2888c	0.34	-0.6
3,197,355	-		Rv2888c	0.35	-0.6
3,197,355	-		Rv2888c	0.35	+0.1
3,197,410	+		Rv2888c	0.38	-0.0
3,197,422	+		Rv2888c	0.39	-0.1
3,197,422	+		Rv2888c	0.39	-2.0
3,197,423	-		Rv2888c	0.39	-0.1
3,197,423	-		Rv2888c	0.39	+0.3