Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2425c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
2,721,441	+		Rv2424c	0.66	-1.5
2,721,879	-				-0.6
2,721,879	-				-0.7
2,721,879	-				-0.5
2,721,879	-				-0.6
2,721,879	-				-0.5
2,722,063	-		Rv2425c	0.14	-0.2
2,722,179	+		Rv2425c	0.22	-0.0
2,722,179	+		Rv2425c	0.22	+0.7
2,722,179	+		Rv2425c	0.22	+0.1
2,722,180	-		Rv2425c	0.22	+0.0
2,722,215	-		Rv2425c	0.24	-0.2
2,722,244	-		Rv2425c	0.26	+3.3
2,722,317	-		Rv2425c	0.31	+0.4
2,722,317	-		Rv2425c	0.31	-0.1
2,722,621	-		Rv2425c	0.52	-0.5
2,722,864	-		Rv2425c	0.69	-0.0
2,722,864	-		Rv2425c	0.69	-0.2
2,722,872	+		Rv2425c	0.70	+2.7
2,722,969	+		Rv2425c	0.76	+0.1
2,723,083	-		Rv2425c	0.84	-0.9
2,723,087	-		Rv2425c	0.85	+0.4
2,723,294	-				+0.2
2,723,309	+				-0.6
2,723,309	+				-1.1
2,723,309	+				-3.3
2,723,469	+		Rv2426c	0.18	-1.6
2,723,469	+		Rv2426c	0.18	-0.3
2,723,506	+		Rv2426c	0.23	+1.0
2,723,507	-		Rv2426c	0.23	-0.0
2,723,507	-		Rv2426c	0.23	-0.3
2,723,597	+		Rv2426c	0.33	-1.0
2,723,907	+		Rv2426c	0.68	-1.9
2,723,925	-		Rv2426c	0.70	-0.6
2,723,925	-		Rv2426c	0.70	+1.1
2,723,925	-		Rv2426c	0.70	-1.5
2,723,954	+		Rv2426c	0.74	-0.1
2,724,218	+				-1.5
2,724,218	+				-0.3