Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1478

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
1,668,382	+				-3.3
1,668,394	+				-3.6
1,668,404	-				+0.3
1,668,407	-				+1.1
1,668,758	+		Rv1478	0.47	-0.1
1,668,758	+		Rv1478	0.47	+0.7
1,668,759	-		Rv1478	0.47	-0.8
1,668,798	-		Rv1478	0.52	-1.3
1,668,890	+		Rv1478	0.65	+0.0
1,668,941	+		Rv1478	0.72	-1.6
1,668,941	+		Rv1478	0.72	-0.2
1,668,941	+		Rv1478	0.72	-0.3
1,668,942	-		Rv1478	0.72	-0.3
1,668,942	-		Rv1478	0.72	-1.1
1,668,942	-		Rv1478	0.72	-0.3
1,669,031	+		Rv1478	0.84	-0.6
1,669,032	-		Rv1478	0.84	+0.8
1,669,032	-		Rv1478	0.84	-1.8
1,669,032	-		Rv1478	0.84	-0.9
1,669,203	+				-1.1
1,669,203	+				-0.1
1,669,203	+				+0.7
1,669,204	+				-0.3