Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1111c

Experiment: 7H9 with Hydrogen peroxide 2.5 mM; pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Hydrogen peroxide 2.5 mM; pH 5.5
1,237,208	+				-0.1
1,237,211	-				-0.7
1,237,211	-				+0.5
1,237,219	+				-0.4
1,237,219	+				-0.5
1,237,294	+				+0.0
1,237,295	-				-0.2
1,237,295	-				-0.4
1,237,295	-				-0.4
1,237,408	+		Rv1111c	0.20	-0.1
1,237,421	-		Rv1111c	0.22	-0.3
1,237,459	+		Rv1111c	0.25	-0.6
1,237,775	-		Rv1111c	0.58	-2.8
1,237,775	-		Rv1111c	0.58	-2.3
1,238,349	-				-1.0
1,238,853	-		Rv1112	0.56	+1.1
1,238,853	-		Rv1112	0.56	-1.5
1,238,853	-		Rv1112	0.56	+0.6