Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3569c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
4,010,078	+		Rv3568c	0.86	-1.4
4,010,283	+				-0.1
4,010,283	+				+1.0
4,010,642	+		Rv3569c	0.51	+0.0
4,010,643	-		Rv3569c	0.51	-0.6
4,010,693	-		Rv3569c	0.57	-0.7
4,010,989	+				+0.6
4,011,062	+				+1.0
4,011,141	+				-0.6
4,011,141	+				-0.8
4,011,584	-		Rv3570c	0.42	+0.5
4,011,710	+		Rv3570c	0.53	+1.0
4,011,710	+		Rv3570c	0.53	-1.2
4,011,711	-		Rv3570c	0.53	-0.5
4,011,723	+		Rv3570c	0.54	+0.4
4,011,723	+		Rv3570c	0.54	-0.2
4,011,724	-		Rv3570c	0.54	+0.1