Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2975c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
3,330,375	+		Rv2974c	0.30	-1.0
3,330,408	-		Rv2974c	0.32	-0.6
3,330,408	-		Rv2974c	0.32	-2.0
3,330,440	-		Rv2974c	0.35	-0.1
3,330,440	-		Rv2974c	0.35	-0.8
3,330,440	-		Rv2974c	0.35	-1.5
3,330,480	+		Rv2974c	0.38	+2.0
3,330,481	-		Rv2974c	0.38	+1.8
3,330,751	-		Rv2974c	0.57	+0.0
3,330,751	-		Rv2974c	0.57	-1.9
3,330,751	-		Rv2974c	0.57	-0.2
3,330,757	+		Rv2974c	0.57	-0.8
3,330,758	-		Rv2974c	0.57	-1.2
3,330,758	-		Rv2974c	0.57	-0.0
3,330,859	+		Rv2974c	0.64	+1.5
3,330,860	-		Rv2974c	0.64	-1.3
3,330,860	-		Rv2974c	0.64	+0.1
3,330,860	-		Rv2974c	0.64	-0.3
3,330,860	-		Rv2974c	0.64	+3.2
3,331,166	+		Rv2974c	0.86	-0.3
3,331,442	+		Rv2975c	0.33	-1.2
3,331,442	+		Rv2975c	0.33	-0.7
3,331,613	+				+0.3
3,331,613	+				+0.7
3,331,614	-				-0.1
3,331,614	-				-0.3
3,331,614	-				+0.4
3,331,668	+				+0.5
3,331,669	-				-1.0
3,332,518	-		Rv2976c	0.65	+0.5