Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2417c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
2,714,472	-		Rv2416c	0.29	-0.9
2,714,666	-		Rv2416c	0.45	+0.1
2,714,859	+		Rv2416c	0.61	+0.2
2,715,314	+				+0.2
2,715,375	+				+0.4
2,715,376	-				-0.4
2,715,473	+				-1.6
2,715,473	+				-2.4
2,715,906	+		Rv2417c	0.51	+0.7
2,716,228	-		Rv2417c	0.90	+0.2
2,716,291	-				-0.4