Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2275

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
2,546,032	-		Rv2272	0.80	+0.7
2,546,291	+		Rv2273	0.57	-0.1
2,546,291	+		Rv2273	0.57	+0.4
2,546,291	+		Rv2273	0.57	-0.1
2,546,305	-		Rv2273	0.62	-1.0
2,546,490	-				-0.4
2,546,707	+		Rv2274c	0.69	-0.9
2,546,708	-		Rv2274c	0.69	-1.2
2,546,779	-				-0.3
2,546,800	-				-2.2
2,547,160	-		Rv2275	0.32	-2.5
2,547,567	+		Rv2275	0.79	-0.4
2,547,568	-		Rv2275	0.79	-1.0
2,547,672	+				-1.3
2,548,234	+		Rv2276	0.41	+0.0
2,548,497	+		Rv2276	0.63	-0.8