Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0913c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
1,016,221	-				-0.6
1,016,537	-		Rv0912	0.67	-0.0
1,016,581	+		Rv0912	0.77	-0.4
1,016,870	+				-0.4
1,017,377	+		Rv0913c	0.11	-0.7
1,017,378	-		Rv0913c	0.11	-1.4
1,017,476	+		Rv0913c	0.17	-1.3
1,017,498	-		Rv0913c	0.19	+0.2
1,017,679	-		Rv0913c	0.31	-2.0
1,017,789	-		Rv0913c	0.38	-0.2
1,017,824	+		Rv0913c	0.40	+0.6
1,018,523	+		Rv0913c	0.87	-0.8
1,019,023	-		Rv0914c	0.24	-0.3
1,019,133	+		Rv0914c	0.33	+2.6
1,019,134	-		Rv0914c	0.33	+0.6
1,019,253	+		Rv0914c	0.42	-0.2
1,019,478	+		Rv0914c	0.61	-0.5
1,019,514	-		Rv0914c	0.64	+1.3
1,019,514	-		Rv0914c	0.64	-0.9
1,019,514	-		Rv0914c	0.64	-0.6
1,019,514	-		Rv0914c	0.64	-0.3
1,019,606	+		Rv0914c	0.71	-1.2