Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0097

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
105,774	+		Rv0096	0.32	-0.4
105,877	+		Rv0096	0.40	-0.3
105,878	-		Rv0096	0.40	-0.3
105,908	+		Rv0096	0.42	+0.7
106,038	+		Rv0096	0.51	-0.2
106,039	-		Rv0096	0.51	-0.4
106,323	+		Rv0096	0.72	-1.0
106,323	+		Rv0096	0.72	-0.1
106,323	+		Rv0096	0.72	-0.6
106,323	+		Rv0096	0.72	+0.2
106,323	+		Rv0096	0.72	-0.5
106,324	-		Rv0096	0.72	-0.9
106,355	+		Rv0096	0.74	-0.4
106,667	+				-0.3
106,667	+				+1.1
106,667	+				-0.9
106,667	+				-0.9
106,667	+				+0.9
106,667	+				+0.1
106,667	+				-0.2
106,668	-				-0.1
106,668	-				+0.8
106,668	-				-0.6
106,808	-				+3.3
106,808	-				-0.4
106,808	-				+0.2
106,859	-		Rv0097	0.14	+0.1
106,942	-		Rv0097	0.24	+1.0
107,034	-		Rv0097	0.34	-1.1
107,107	-		Rv0097	0.43	-0.2
107,107	-		Rv0097	0.43	-0.3
107,245	+		Rv0097	0.59	+0.2
107,245	+		Rv0097	0.59	-0.5
107,245	+		Rv0097	0.59	+0.3
107,246	-		Rv0097	0.59	-0.4
107,246	-		Rv0097	0.59	-0.5
107,329	-		Rv0097	0.68	-0.2
107,452	+		Rv0097	0.83	-0.9
107,452	+		Rv0097	0.83	-0.1
107,453	-		Rv0097	0.83	+0.2
107,453	-		Rv0097	0.83	-0.2
107,453	-		Rv0097	0.83	-0.2
107,453	-		Rv0097	0.83	+0.7
107,453	-		Rv0097	0.83	-0.3
107,453	-		Rv0097	0.83	-0.4
107,453	-		Rv0097	0.83	-0.3
107,456	+		Rv0097	0.83	-0.9
107,457	-		Rv0097	0.83	+0.7
107,457	-		Rv0097	0.83	-0.2
107,797	+		Rv0098	0.36	+0.4
107,927	+		Rv0098	0.59	-0.9
108,356	+		Rv0099	0.12	+0.1
108,393	+		Rv0099	0.15	-0.1