Experiment: R2A with 1-octen-3-ol 1.3568235 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS13710 and ABIE51_RS13715 are separated by 137 nucleotides ABIE51_RS13715 and ABIE51_RS13720 are separated by 23 nucleotides
ABIE51_RS13710: ABIE51_RS13710 - dicarboxylate/amino acid:cation symporter, at 2,972,532 to 2,973,791
_RS13710
ABIE51_RS13715: ABIE51_RS13715 - tRNA-Arg, at 2,973,929 to 2,974,005
_RS13715
ABIE51_RS13720: ABIE51_RS13720 - aldehyde dehydrogenase family protein, at 2,974,029 to 2,975,561
_RS13720
Position (kb)
2973
2974
2975 Strain fitness (log2 ratio)
-2
-1
0
1 at 2973.205 kb on - strand, within ABIE51_RS13710 at 2973.228 kb on + strand, within ABIE51_RS13710 at 2973.229 kb on - strand, within ABIE51_RS13710 at 2973.229 kb on - strand, within ABIE51_RS13710 at 2973.229 kb on - strand, within ABIE51_RS13710 at 2973.252 kb on + strand, within ABIE51_RS13710 at 2973.252 kb on + strand, within ABIE51_RS13710 at 2973.252 kb on + strand, within ABIE51_RS13710 at 2973.252 kb on + strand, within ABIE51_RS13710 at 2973.253 kb on - strand, within ABIE51_RS13710 at 2973.253 kb on - strand, within ABIE51_RS13710 at 2973.253 kb on - strand, within ABIE51_RS13710 at 2973.469 kb on - strand, within ABIE51_RS13710 at 2973.469 kb on - strand, within ABIE51_RS13710 at 2973.469 kb on - strand, within ABIE51_RS13710 at 2973.501 kb on + strand, within ABIE51_RS13710 at 2973.501 kb on + strand, within ABIE51_RS13710 at 2973.553 kb on + strand, within ABIE51_RS13710 at 2973.553 kb on + strand, within ABIE51_RS13710 at 2973.553 kb on + strand, within ABIE51_RS13710 at 2973.554 kb on - strand, within ABIE51_RS13710 at 2973.554 kb on - strand, within ABIE51_RS13710 at 2973.554 kb on - strand, within ABIE51_RS13710 at 2974.083 kb on + strand at 2974.194 kb on + strand, within ABIE51_RS13720 at 2974.194 kb on + strand, within ABIE51_RS13720 at 2974.425 kb on + strand, within ABIE51_RS13720 at 2974.467 kb on + strand, within ABIE51_RS13720 at 2974.467 kb on + strand, within ABIE51_RS13720 at 2974.467 kb on + strand, within ABIE51_RS13720 at 2974.467 kb on + strand, within ABIE51_RS13720 at 2974.571 kb on + strand, within ABIE51_RS13720 at 2974.992 kb on + strand, within ABIE51_RS13720 at 2974.992 kb on + strand, within ABIE51_RS13720
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 1.3568235 mM remove 2,973,205 - ABIE51_RS13710 0.53 -0.2 2,973,228 + ABIE51_RS13710 0.55 +0.2 2,973,229 - ABIE51_RS13710 0.55 -0.3 2,973,229 - ABIE51_RS13710 0.55 -0.1 2,973,229 - ABIE51_RS13710 0.55 -0.4 2,973,252 + ABIE51_RS13710 0.57 +0.0 2,973,252 + ABIE51_RS13710 0.57 +0.6 2,973,252 + ABIE51_RS13710 0.57 +0.7 2,973,252 + ABIE51_RS13710 0.57 +1.2 2,973,253 - ABIE51_RS13710 0.57 +0.5 2,973,253 - ABIE51_RS13710 0.57 -1.2 2,973,253 - ABIE51_RS13710 0.57 +0.2 2,973,469 - ABIE51_RS13710 0.74 -0.8 2,973,469 - ABIE51_RS13710 0.74 -0.3 2,973,469 - ABIE51_RS13710 0.74 -0.1 2,973,501 + ABIE51_RS13710 0.77 +0.3 2,973,501 + ABIE51_RS13710 0.77 +0.3 2,973,553 + ABIE51_RS13710 0.81 -0.0 2,973,553 + ABIE51_RS13710 0.81 -0.5 2,973,553 + ABIE51_RS13710 0.81 +0.6 2,973,554 - ABIE51_RS13710 0.81 +0.3 2,973,554 - ABIE51_RS13710 0.81 -0.8 2,973,554 - ABIE51_RS13710 0.81 -0.8 2,974,083 + -1.2 2,974,194 + ABIE51_RS13720 0.11 -0.4 2,974,194 + ABIE51_RS13720 0.11 -0.4 2,974,425 + ABIE51_RS13720 0.26 -1.4 2,974,467 + ABIE51_RS13720 0.29 -2.2 2,974,467 + ABIE51_RS13720 0.29 -1.8 2,974,467 + ABIE51_RS13720 0.29 -1.4 2,974,467 + ABIE51_RS13720 0.29 -1.2 2,974,571 + ABIE51_RS13720 0.35 -0.7 2,974,992 + ABIE51_RS13720 0.63 -0.4 2,974,992 + ABIE51_RS13720 0.63 -0.2
Or see this region's nucleotide sequence