Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3657c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
4,094,562	-				-0.1
4,094,585	-				-0.5
4,094,613	-				+0.1
4,094,613	-				-0.7
4,094,650	+				-1.3
4,094,924	+				+1.7
4,094,924	+				-0.5
4,094,929	-				-0.2
4,095,164	-		Rv3655c	0.64	+2.0
4,095,164	-		Rv3655c	0.64	+2.0
4,095,210	+		Rv3655c	0.76	-0.8
4,095,211	-		Rv3655c	0.76	-1.9
4,095,445	+		Rv3656c	0.58	-1.3
4,095,531	-				-0.4
4,095,583	-				-0.7
4,095,777	+		Rv3657c	0.41	-1.2
4,096,023	+		Rv3657c	0.84	-0.5
4,096,310	+		Rv3658c	0.21	-0.1
4,096,711	-		Rv3658c	0.71	-1.1
4,096,930	+				-0.6