Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2063A

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
2,320,279	-		Rv2062c	0.87	-0.3
2,320,443	+				+0.8
2,320,443	+				-0.0
2,320,444	-				-1.9
2,320,444	-				-0.3
2,320,444	-				-0.7
2,320,824	+				+1.7
2,321,163	+		Rv2063A	0.26	-0.7
2,321,163	+		Rv2063A	0.26	-0.5
2,321,263	-		Rv2063A	0.50	-0.6
2,321,729	+		Rv2064	0.25	+0.5
2,322,041	-		Rv2064	0.54	+2.1