Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1128c

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
1,250,902	+		Rv1127c	0.66	+0.2
1,250,947	+		Rv1127c	0.69	-0.4
1,251,322	+				+2.6
1,251,323	-				+3.6
1,251,421	+				+1.6
1,251,425	+				-0.1
1,251,426	-				-0.8
1,251,515	+				+1.2
1,251,667	+				-0.4
1,252,156	+		Rv1128c	0.40	+1.7
1,252,380	-		Rv1128c	0.56	-0.1
1,252,577	+		Rv1128c	0.71	+0.2
1,252,984	-				+0.4
1,252,984	-				-0.6
1,253,037	+				+1.6
1,253,037	+				+0.3