Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0981

Experiment: pH 5.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 5.5
1,096,205	+		Rv0980c	0.82	-0.5
1,096,205	+		Rv0980c	0.82	+0.2
1,096,205	+		Rv0980c	0.82	-0.8
1,096,768	+				-0.7
1,096,769	-				-0.4
1,096,769	-				+0.4
1,097,114	-		Rv0981	0.43	+0.6
1,097,118	-		Rv0981	0.43	+0.7
1,097,118	-		Rv0981	0.43	+1.0
1,097,364	-		Rv0981	0.79	-0.5
1,097,364	-		Rv0981	0.79	+0.4
1,097,416	+		Rv0981	0.86	+0.3
1,097,417	-		Rv0981	0.87	-0.0
1,097,420	+		Rv0981	0.87	-0.2
1,097,420	+		Rv0981	0.87	+0.1
1,097,421	-		Rv0981	0.87	+0.7
1,097,421	-		Rv0981	0.87	+1.3
1,097,421	-		Rv0981	0.87	-0.3
1,097,482	+				+0.2
1,097,490	-				-0.2