Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3213c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
3,590,623	+				-1.5
3,590,724	+				+0.1
3,590,724	+				-0.1
3,590,933	+		Rv3213c	0.30	+0.2
3,590,933	+		Rv3213c	0.30	+1.1
3,590,934	-		Rv3213c	0.30	+0.8
3,590,934	-		Rv3213c	0.30	+0.0
3,590,934	-		Rv3213c	0.30	-0.8
3,591,320	-		Rv3213c	0.78	+0.2
3,591,432	+				+0.7
3,591,493	-				+2.3
3,591,493	-				+1.2
3,591,617	+				-0.9
3,591,618	-				+0.0
3,591,881	+		Rv3214	0.38	-0.9