Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3039c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
3,399,409	-				-0.2
3,399,409	-				-0.3
3,399,411	-				-1.5
3,399,411	-				-1.6
3,399,480	+				+0.1
3,399,525	+		Rv3039c	0.14	+0.9
3,399,525	+		Rv3039c	0.14	-0.0
3,399,526	-		Rv3039c	0.14	+1.7
3,399,526	-		Rv3039c	0.14	-0.3
3,400,344	+		Rv3040c	0.18	+0.5
3,400,345	-		Rv3040c	0.18	+0.2
3,400,493	-		Rv3040c	0.35	-1.1
3,400,512	-		Rv3040c	0.37	-0.6
3,400,512	-		Rv3040c	0.37	-0.9
3,401,105	-				-1.6