Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2859c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
3,169,774	+		Rv2858c	0.31	-0.3
3,169,775	-		Rv2858c	0.31	-0.2
3,170,440	+		Rv2858c	0.79	-1.2
3,170,718	-				-0.3
3,170,834	+		Rv2859c	0.12	+0.2
3,170,835	-		Rv2859c	0.12	+0.7
3,170,835	-		Rv2859c	0.12	-0.6
3,170,853	-		Rv2859c	0.14	+1.5
3,171,161	+		Rv2859c	0.48	+0.4
3,171,228	+		Rv2859c	0.55	+1.1
3,171,229	-		Rv2859c	0.55	-0.2
3,171,384	+		Rv2859c	0.72	+0.4
3,171,398	-		Rv2859c	0.73	-1.6
3,171,429	+		Rv2859c	0.76	+0.2
3,171,628	+				+0.5
3,171,628	+				-0.4
3,171,648	+				-1.5
3,171,648	+				-0.3
3,171,874	+		Rv2860c	0.18	+0.4
3,171,875	-		Rv2860c	0.18	-0.2
3,172,051	+		Rv2860c	0.31	+1.7
3,172,059	-		Rv2860c	0.31	-0.0
3,172,235	-		Rv2860c	0.44	+0.2
3,172,481	-		Rv2860c	0.62	+0.4