Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2351c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
2,629,559	+		Rv2350c	0.51	-0.1
2,629,605	-		Rv2350c	0.54	+0.6
2,629,605	-		Rv2350c	0.54	-1.3
2,629,605	-		Rv2350c	0.54	-1.3
2,629,661	+		Rv2350c	0.57	-0.1
2,629,662	-		Rv2350c	0.57	-0.5
2,629,662	-		Rv2350c	0.57	+1.1
2,629,678	+		Rv2350c	0.58	-0.3
2,629,681	-		Rv2350c	0.58	-1.4
2,629,745	+		Rv2350c	0.63	-1.0
2,630,145	-		Rv2350c	0.89	+1.6
2,630,388	+				-0.3
2,630,388	+				-1.4
2,630,388	+				+1.8
2,630,389	-				+0.1
2,630,389	-				+0.7
2,630,390	+				-0.2
2,630,391	-				+0.8
2,630,663	-				-0.3
2,630,890	-		Rv2351c	0.23	-0.3
2,630,890	-		Rv2351c	0.23	-1.3
2,631,057	+		Rv2351c	0.34	-0.3
2,631,057	+		Rv2351c	0.34	-0.7
2,631,057	+		Rv2351c	0.34	+0.2
2,631,057	+		Rv2351c	0.34	+0.7
2,631,057	+		Rv2351c	0.34	+0.0
2,631,057	+		Rv2351c	0.34	-1.1
2,631,058	-		Rv2351c	0.34	-0.4
2,631,058	-		Rv2351c	0.34	-1.1
2,631,058	-		Rv2351c	0.34	+0.1
2,631,068	-		Rv2351c	0.35	-0.9
2,631,188	+		Rv2351c	0.42	-1.4
2,631,247	-		Rv2351c	0.46	-0.2
2,631,247	-		Rv2351c	0.46	-0.7
2,631,264	+		Rv2351c	0.47	+0.9
2,631,264	+		Rv2351c	0.47	-1.4
2,631,265	-		Rv2351c	0.47	-0.2
2,631,265	-		Rv2351c	0.47	-0.4
2,631,323	-		Rv2351c	0.51	+0.1
2,631,370	-		Rv2351c	0.54	+1.1
2,631,615	+		Rv2351c	0.70	-0.4
2,631,615	+		Rv2351c	0.70	-0.7
2,631,616	-		Rv2351c	0.70	-0.6
2,631,616	-		Rv2351c	0.70	-0.4
2,631,619	-		Rv2351c	0.70	-0.1
2,631,639	+		Rv2351c	0.72	-0.9
2,631,639	+		Rv2351c	0.72	-0.4
2,631,639	+		Rv2351c	0.72	+0.8
2,631,639	+		Rv2351c	0.72	-0.3
2,631,639	+		Rv2351c	0.72	-0.5
2,631,639	+		Rv2351c	0.72	-0.5
2,631,639	+		Rv2351c	0.72	+0.3
2,631,639	+		Rv2351c	0.72	-0.7
2,631,639	+		Rv2351c	0.72	+0.0
2,631,639	+		Rv2351c	0.72	+0.1
2,631,640	-		Rv2351c	0.72	-1.8
2,631,640	-		Rv2351c	0.72	-3.4
2,631,640	-		Rv2351c	0.72	-1.1
2,631,640	-		Rv2351c	0.72	-0.3
2,631,640	-		Rv2351c	0.72	-0.2
2,631,640	-		Rv2351c	0.72	-0.3
2,631,640	-		Rv2351c	0.72	-1.9
2,631,640	-		Rv2351c	0.72	+0.2
2,631,640	-		Rv2351c	0.72	+0.3
2,631,640	-		Rv2351c	0.72	-2.7
2,631,640	-		Rv2351c	0.72	+0.1
2,631,640	-		Rv2351c	0.72	-2.0
2,631,640	-		Rv2351c	0.72	-1.0
2,631,640	-		Rv2351c	0.72	-1.4
2,631,640	-		Rv2351c	0.72	+0.3
2,631,900	+		Rv2351c	0.89	-1.6
2,631,901	-		Rv2351c	0.89	-0.4
2,631,941	-				-0.2
2,631,984	+				+0.7
2,632,138	-				-1.9
2,632,590	+				-0.0
2,632,791	-				+1.7
2,632,798	+				-0.7
2,632,798	+				+0.4
2,632,798	+				+0.7
2,632,799	-				-1.0
2,632,799	-				-0.9
2,632,799	-				-0.0
2,632,924	+				-0.4
2,633,013	-				-0.7
2,633,034	-				-0.0