Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1136

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
1,263,668	+		Rv1135c	0.75	+1.7
1,263,669	-		Rv1135c	0.75	+0.0
1,263,711	-		Rv1135c	0.77	-0.6
1,263,711	-		Rv1135c	0.77	-3.1
1,263,711	-		Rv1135c	0.77	-0.5
1,263,764	-		Rv1135c	0.80	+0.5
1,263,839	+		Rv1135c	0.84	+0.0
1,263,914	+		Rv1135c	0.88	-1.1
1,264,015	+				+0.2
1,264,337	+				+0.1
1,264,380	+		Rv1135A	0.27	-0.9
1,264,462	+		Rv1135A	0.61	+1.7
1,264,615	-				+0.6
1,264,615	-				-2.0
1,264,998	+				-0.3
1,265,315	-		Rv1137c	0.62	-1.8
1,265,357	+		Rv1137c	0.73	-0.2
1,265,358	-		Rv1137c	0.73	-3.1
1,265,920	+		Rv1138c	0.44	-0.7
1,265,920	+		Rv1138c	0.44	-2.1
1,265,921	-		Rv1138c	0.44	-0.3
1,265,921	-		Rv1138c	0.44	+0.2