Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3307

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
3,693,278	-		Rv3306c	0.40	+3.6
3,693,375	+		Rv3306c	0.48	-0.3
3,693,419	+		Rv3306c	0.52	+1.2
3,693,998	+				-0.5
3,694,040	+				+1.8
3,694,268	+		Rv3307	0.27	-2.6
3,694,349	-		Rv3307	0.37	-0.1
3,694,396	-		Rv3307	0.42	+0.2
3,694,396	-		Rv3307	0.42	+0.8
3,694,396	-		Rv3307	0.42	-1.6
3,694,532	-		Rv3307	0.59	-1.3
3,694,615	+		Rv3307	0.70	-0.9
3,694,615	+		Rv3307	0.70	-0.2
3,694,730	+		Rv3307	0.84	-0.3
3,694,858	+				-1.4
3,695,300	-		Rv3308	0.27	+0.2
3,695,309	-		Rv3308	0.28	-1.8
3,695,452	-		Rv3308	0.37	+1.8
3,695,452	-		Rv3308	0.37	+0.1
3,695,452	-		Rv3308	0.37	-0.5
3,695,578	-		Rv3308	0.44	+0.7