Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2140c

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
2,399,791	+				+0.0
2,399,792	-				-1.8
2,399,792	-				-0.1
2,399,812	-				-3.7
2,399,868	+		Rv2140c	0.13	-2.5
2,399,868	+		Rv2140c	0.13	-1.5
2,399,931	+		Rv2140c	0.25	+0.2
2,399,932	-		Rv2140c	0.25	-0.8
2,400,129	+		Rv2140c	0.62	+1.8
2,400,307	-				-4.0
2,400,401	-				-0.6
2,400,650	+		Rv2141c	0.20	-0.3
2,400,650	+		Rv2141c	0.20	-0.2
2,400,650	+		Rv2141c	0.20	-1.3
2,400,650	+		Rv2141c	0.20	+1.0
2,400,651	-		Rv2141c	0.20	-0.3
2,400,794	+		Rv2141c	0.31	-0.9
2,400,794	+		Rv2141c	0.31	+0.3
2,400,814	-		Rv2141c	0.33	+0.7
2,400,832	+		Rv2141c	0.34	+0.1
2,400,832	+		Rv2141c	0.34	+0.0
2,400,833	-		Rv2141c	0.34	+0.8
2,401,119	-		Rv2141c	0.55	-0.7
2,401,119	-		Rv2141c	0.55	+0.5
2,401,215	+		Rv2141c	0.62	-2.0
2,401,241	+		Rv2141c	0.64	+0.2
2,401,241	+		Rv2141c	0.64	+1.2
2,401,242	-		Rv2141c	0.64	-1.0