Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1731

Experiment: pH 4.5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pH 4.5
1,956,693	-		Rv1730c	0.64	+0.4
1,956,986	+		Rv1730c	0.83	-0.3
1,957,370	-				+0.0
1,957,631	+				-1.1
1,957,676	+				-0.6
1,958,025	+		Rv1731	0.22	-1.0
1,958,063	+		Rv1731	0.25	-0.4
1,958,109	+		Rv1731	0.28	+0.3
1,958,109	+		Rv1731	0.28	-0.7
1,958,151	+		Rv1731	0.30	+0.4
1,958,152	-		Rv1731	0.31	-0.7
1,958,238	+		Rv1731	0.36	-0.1
1,958,269	-		Rv1731	0.38	-0.5
1,958,356	-		Rv1731	0.44	-3.0
1,958,559	+		Rv1731	0.57	+0.3
1,958,559	+		Rv1731	0.57	-0.9
1,958,661	-		Rv1731	0.63	-0.8
1,958,860	-		Rv1731	0.76	-1.1
1,959,007	-		Rv1731	0.85	-1.5
1,959,191	-				+0.8
1,959,479	-		Rv1732c	0.43	-0.3
1,959,484	+		Rv1732c	0.44	-2.1
1,959,647	-		Rv1732c	0.74	-1.1
1,959,803	+				+0.2
1,959,804	-				-1.9